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sam-bam

Here are 5 public repositories matching this topic...

seqan / seqan

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SeqAn's official repository.

high-performance cpp14 indexing simd alignment bwt fasta blast fastq-format bioinfomatics suffixarray sequence-alignments seqan htslib sam-bam

Updated Aug 18, 2020
C++

BioJulia / ReadDatastores.jl

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Datastores for reads, not your papa's FASTQ files.

files bam-files bioinformatics genomics storage biology format sequencing fastq-format bioinformatics-data sam-bam fastq fastq-files biojulia sam-file sam-files genomics-data bam-format

Updated Jun 7, 2020
Julia

Shao-Group / bamkit

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A tool to process bam/sam files

rna-seq sam-bam

Updated Jun 12, 2020
C++

anegm98 / Chimaera

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parsing SAM files to extract chimeric alignments and reporting each chimeric locus with its supporting reads

sam sam-bam sam-files chimeric-alignment sam-parser

Updated May 3, 2020
C++

cbp44 / samflags

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Command line utility to decode SAM flags to explain what they mean.

bioinformatics sam bam sam-bam samtools bioinformatics-scripts sam-flags

Updated Sep 1, 2017
JavaScript

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