Cytoscape Consortium

Repositories

diffusion

A Cytoscape app to interface with the heat diffusion service

Java 2 2 15 1 Updated Jul 30, 2020

cytoscape.js-compound-drag-and-drop

Compound node drag-and-drop UI for adding and removing children

JavaScript MIT 3 10 1 2 Updated Jul 30, 2020

cyannotation-cx2js

Renders Cytoscape Desktop annotations from CX files via cytoscape.js-canvas

JavaScript MIT 0 0 3 3 Updated Jul 30, 2020

cytoscape.js-cxtmenu

Context menu for Cytoscape.js

cytoscapejs cytoscapejs-extension

JavaScript MIT 64 100 0 2 Updated Jul 30, 2020

cytoscape-jupyter-widget

Cytoscape.js based network visualizer for Jupyter Notebook

JavaScript 10 28 10 4 Updated Jul 30, 2020

cytoscape.js-dagre

The Dagre layout for DAGs and trees for Cytoscape.js

cytoscapejs cytoscapejs-extension

JavaScript MIT 59 127 0 3 Updated Jul 30, 2020

cx2js

A CX to Cytoscape JS library

JavaScript MIT 0 3 18 2 Updated Jul 30, 2020

cytoscape.js-popper

A wrapper for Popper.js that lets you position divs relative to Cytoscape elements

JavaScript MIT 16 39 1 3 Updated Jul 30, 2020

cytoscape.js-cola

The Cola.js physics simulation layout for Cytoscape.js

cytoscapejs cytoscapejs-extension

JavaScript MIT 41 76 0 3 Updated Jul 29, 2020

cytoscape-impl

Cytoscape 3 implementation bundles.

Java LGPL-2.1 34 26 0 0 Updated Jul 29, 2020

cy-community-detection

Community Detection App for Cytoscape

Java BSD-3-Clause 1 1 9 0 Updated Jul 28, 2020

cytoscape-gui-distribution

Cytoscape 3 desktop version.

Java 12 12 0 0 Updated Jul 28, 2020

cy-ndex-2

A Cytoscape client app for the NDEx database

Java MIT 1 0 21 1 Updated Jul 28, 2020

cytoscape-api

Cytoscape 3 API bundles.

Java LGPL-2.1 25 16 0 0 Updated Jul 24, 2020

cytoscape.js

Graph theory (network) library for visualisation and analysis

javascript analysis network visualisation graph-theory cytoscapejs

JavaScript 1,271 6,817 14 0 Updated Jul 24, 2020

PathwayStudioImporter

Forked from BrettJSettle/PathwayStudioImporter

Cytoscape Importer app for Pathway Studio files

Java 1 0 0 0 Updated Jul 24, 2020

ndex-interactome-search

Interactome search service for NDEx iQuery

Java 2 1 0 0 Updated Jul 20, 2020

cx-viz-converter

JavaScript MIT 0 0 0 1 Updated Jul 20, 2020

wineandcheesemap

JavaScript MIT 32 38 0 2 Updated Jul 18, 2020

cytoscape-tutorials

Collection of modular Cytoscape tutorials for online presentation using reveal.js

HTML CC0-1.0 84 171 22 (1 issue needs help) 2 Updated Jul 18, 2020

cytoscape.js-cose-bilkent

The CoSE layout for Cytoscape.js by Bilkent with enhanced compound node placement.

cytoscapejs cytoscapejs-extension

HTML MIT 34 79 18 2 Updated Jul 18, 2020

cytoscape.js-elk

The ELK layout algorithm adapter for Cytoscape.js

JavaScript MIT 11 9 8 6 Updated Jul 18, 2020

analyzer

Stripped down version of Network Analyzer core app

Java 0 0 2 0 Updated Jul 17, 2020

cytoscape-explore

JavaScript MIT 0 4 15 0 Updated Jul 16, 2020

communitydetection-rest-server

Community Detection REST Service

Java BSD-3-Clause 1 0 0 1 Updated Jul 15, 2020

cytoscape.github.com

Cytoscape org web site.

HTML 15 20 0 1 Updated Jul 14, 2020

cyREST

Forked from idekerlab/cyREST

Core App: REST API module for Cytoscape

JavaScript MIT 26 23 46 0 Updated Jul 15, 2020

cx

CX serialization and de-serialization in Cytoscape

Java 0 1 8 1 Updated Jul 14, 2020

py2cytoscape

Python utilities for Cytoscape and Cytoscape.js

Python MIT 43 149 20 (1 issue needs help) 3 Updated Jul 13, 2020

docker-cytoscape-desktop

Forked from cannin/docker-cytoscape-desktop

Dockerfile 5 3 0 1 Updated Jul 12, 2020