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Arctic Code Vault Contributor

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Arctic Code Vault Contributor

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@neherlab @conda-forge @bioconda @nextstrain
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1,907 contributions in the last year

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Contribution activity

December 2021

Created 356 commits in 19 repositories
Created 13 repositories

Created a pull request in conda-forge/staged-recipes that received 30 comments

Moving tsv-utils from bioconda

It'd be great if someone @conda-forge/staged-recipes could help me get this D package compiling successfully. Checklist Title of this PR is meani…

+57 −70 • 30 comments
Opened 38 other pull requests in 15 repositories
bioconda/bioconda-recipes 4 merged 5 closed
nextstrain/ncov 6 merged
nextstrain/ncov-clades-schema 5 merged
nextstrain/nextclade 3 merged
nextstrain/nextclade_data 3 merged
conda-forge/staged-recipes 2 merged
hroptatyr/sample 2 merged
nextstrain/augur 1 merged
github/docs 1 open
tcr/macos-profiler 1 open
rust-lang/book 1 open
eBay/tsv-utils 1 open
aormsby/Fork-Sync-With-Upstream-action 1 open
clap-rs/clap 1 merged
broadinstitute/pyro-cov 1 merged
Reviewed 8 pull requests in 5 repositories
conda-forge/staged-recipes 3 pull requests
nextstrain/nextclade 2 pull requests
nextstrain/ncov-ingest 1 pull request
nextstrain/augur 1 pull request
bioconda/bioconda-recipes 1 pull request

Created an issue in domoritz/csv2parquet that received 10 comments

Feature: allow reading from stdin (ideally with schema inference)

I would like to read 100GB of SARS-CoV-2 sequence data (6m records) into .parquet from .tsv Unfortunately, csv2parquet doesn't allow me to provide …

10 comments
Opened 76 other issues in 29 repositories
bioconda/bioconda-recipes 1 open 10 closed
duckdb/duckdb 6 open 2 closed
shenwei356/seqkit 4 open 3 closed
nextstrain/nextclade 5 open 1 closed
cevo-public/cov-spectrum-website 3 closed 1 open
corneliusroemer/bioconda-sync-monitor 3 open
cldellow/csv2parquet 3 open
nextstrain/augur 2 open 1 closed
duckdb/duckdb-web 2 open
apache/arrow-rs 2 open
domoritz/csv2parquet 2 closed
github/docs 1 closed 1 open
cli/cli 2 closed
cov-lineages/pango-designation 2 open
SZJShuffle/pySankey2 2 open
eBay/tsv-utils 2 open
hroptatyr/sample 2 closed
corneliusroemer/nextclade-full-run 2 open
matplotlib/matplotlib 1 open
tiangolo/fastapi 1 open
conda/conda 1 open
iqtree/iqtree2 1 open
github/super-linter 1 open
GitCredentialManager/git-credential-manager 1 closed
nextstrain/ncov-ingest 1 open
4 repositories not shown

Joined the Bioconda organization

@bioconda
Bioconda

Joined the conda-forge organization

@conda-forge
conda-forge

A community led collection of recipes, build infrastructure and distributions for the conda package manager.

9 contributions in private repositories Dec 1 – Dec 15

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