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macs3-project.github.io/MACS

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How does MACS deal with read pairs that only have one read aligned in the peak region?

alexanderkzee asked Jan 26, 2022 in Q&A · Unanswered

1
MACS3 or 2 for production?

douglas-hoen started Dec 9, 2021 in General

0
Are multi mapped reads used in ChIP-sea peaking calling such as MACS2?

xingerguan asked Dec 6, 2021 in Q&A · Unanswered

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How should I process a chip-seq data that each sample with a input by macs2

ryrl9703 asked Oct 26, 2021 in Q&A · Unanswered

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PE sequencing / MACS / atacseq

bazyliszek asked Sep 8, 2021 in Q&A · Unanswered

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Welcome to MACS Discussions!

taoliu started Dec 8, 2020 in General

1
We used MACS2 and did not enter values for the parameters shift and extension size. I would appreciate if anyone could tell me what are the default values in MACS2. Thanks

AlexClop asked Jul 29, 2021 in Q&A · Unanswered

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ATAC-seq peak calling

igordot asked Dec 10, 2020 in Q&A · Unanswered

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